AI-Based Computational Vaccine Design against SARS-CoV-2

  • Unique Paper ID: 204824
  • Volume: 13
  • Issue: 1
  • PageNo: 4310-4322
  • Abstract:
  • The cases of highly pathogenic viruses such as zika virus, Ebola virus, Marburg virus, and SARS-CoV-2 are increasing constantly and posing serious threats to global public health and highlighting the critical need for quick, safe, and efficient preventive measures against these diseases [1]. Vaccination remains one of the most effective strategies for preventing viral infections. However, conventional vaccine development techniques are costly, time-consuming, and limited by stringent biosafety regulations [2]. Due to the integration of artificial intelligence with immune-informatics, it becomes a promising and effective method for the vaccine design. Therefore, we are focusing the multi-epitope vaccine design against SARS-CoV-2. For multi-epitope vaccine design, the membrane protein of SARS-CoV-2 was selected as the target due to its high antigenic potential and non-allergenic nature [3] Physicochemical properties of the protein were analyzed using ExPASy ProtParam, while secondary and tertiary structures were predicted using PSIPRED and trRosetta, respectively. Cytotoxic T-lymphocyte (MHC class I) and helper T-lymphocyte (MHC class II) epitopes were predicted using the Immune Epitope Database (IEDB). The selected epitopes were assembled into a multi-epitope vaccine construct using suitable linkers and an adjuvant to enhance immunogenicity [4]. Subsequently, the designed vaccine construct underwent structural assessment, molecular docking analysis using ClusPro, and immune simulation using C-ImmSim. The results demonstrated the potential of the vaccine construct to elicit a strong immune response. Overall, this study provides a computationally validated framework for the rational design of multi-epitope vaccines against high-risk viral pathogens and establishes a foundation for future experimental validation.

Copyright & License

Copyright © 2026 Authors retain the copyright of this article. This article is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

BibTeX

@article{204824,
        author = {Pratik Sambhaji Sawai and Deekshitha P and Vaishnavi pawar and Bhoomika Varshney and Hridya Ramesh and Adinath Palve and Vipin Hiremath},
        title = {AI-Based Computational Vaccine Design against SARS-CoV-2},
        journal = {International Journal of Innovative Research in Technology},
        year = {2026},
        volume = {13},
        number = {1},
        pages = {4310-4322},
        issn = {2349-6002},
        url = {https://ijirt.org/article?manuscript=204824},
        abstract = {The cases of highly pathogenic viruses such as zika virus, Ebola virus, Marburg virus, and SARS-CoV-2 are increasing constantly and posing serious threats to global public health and highlighting the critical need for quick, safe, and efficient preventive measures against these diseases [1]. Vaccination remains one of the most effective strategies for preventing viral infections. However, conventional vaccine development techniques are costly, time-consuming, and limited by stringent biosafety regulations [2]. Due to the integration of artificial intelligence with immune-informatics, it becomes a promising and effective method for the vaccine design. 
Therefore, we are focusing the multi-epitope vaccine design against SARS-CoV-2. For multi-epitope vaccine design, the membrane protein of SARS-CoV-2 was selected as the target due to its high antigenic potential and non-allergenic nature [3] Physicochemical properties of the protein were analyzed using ExPASy ProtParam, while secondary and tertiary structures were predicted using PSIPRED and trRosetta, respectively. Cytotoxic T-lymphocyte (MHC class I) and helper T-lymphocyte (MHC class II) epitopes were predicted using the Immune Epitope Database (IEDB). The selected epitopes were assembled into a multi-epitope vaccine construct using suitable linkers and an adjuvant to enhance immunogenicity [4].
Subsequently, the designed vaccine construct underwent structural assessment, molecular docking analysis using ClusPro, and immune simulation using C-ImmSim. The results demonstrated the potential of the vaccine construct to elicit a strong immune response. Overall, this study provides a computationally validated framework for the rational design of multi-epitope vaccines against high-risk viral pathogens and establishes a foundation for future experimental validation.},
        keywords = {Vaccine, Multi-Epitopes, Artificial Intelligence, Immuno-informatics, Antigenicity, Allergenicity},
        month = {June},
        }

Cite This Article

Sawai, P. S., & P, D., & pawar, V., & Varshney, B., & Ramesh, H., & Palve, A., & Hiremath, V. (2026). AI-Based Computational Vaccine Design against SARS-CoV-2. International Journal of Innovative Research in Technology (IJIRT), 13(1), 4310–4322.

Related Articles